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Intron Name: Anas_platyrhynchos_platyrhynchos_29_1786916_1788139_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1786916 - 1788139

Intron Length:

1224

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGTCTT

5'SS Class:

strong_major

3'SS Sequence:

TTGCTGTGTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAATGAT

U12 Branch Point Sequence:

GTAATGATACTT

Flanking Amino Acid:

SKLQQRLGREVEEKIKQTHR

Intron Amino Acid Position:

112

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

97.2

1.11

0.7

90.9

28.7

Major BPS

76.8

0.67

40.9

Major PPT

69.8

0.45

65.4

Minor 5ss

40.2

-1.1

3.1

58.6

45.9

Minor BPS

-0.8

2.2

54.64

41.2

Associated Gene:

Gene:

LONP1

Ensembl Gene ID:

ENSAPLG00000010693

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011190

1784175 - 1799438

15264