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Intron Name: Anas_platyrhynchos_platyrhynchos_29_1791886_1793054_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

1791886 - 1793054

Intron Length:

1169

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGTGTA

5'SS Class:

strong_major

3'SS Sequence:

TGTGGTAAAACAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TAAACAT

U12 Branch Point Sequence:

CTTCCCTAAACA

Flanking Amino Acid:

MTDVAEIKGHRRTYVGAMPG

Intron Amino Acid Position:

291

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

93.2

1.02

0.7

86.6

22.2

Major BPS

63.2

0.33

1.1

69.6

35.7

Major PPT

58.3

0.19

1.1

52.2

45.2

Minor 5ss

30.8

-2.2

3.2

39.9

46.1

Minor BPS

67.5

0.55

1.7

76.69

40.5

Associated Gene:

Gene:

LONP1

Ensembl Gene ID:

ENSAPLG00000010693

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011190

1784175 - 1799438

15264