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Intron Name: Anas_platyrhynchos_platyrhynchos_29_1804008_1804090_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1804008 - 1804090

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGGAGC

5'SS Class:

strong_major

3'SS Sequence:

TCTCTCCCCGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CGCTGAC

U12 Branch Point Sequence:

TCAGCGCTGACC

Flanking Amino Acid:

FRCGAIGGAADMAIRYPMAV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.2

0.83

0.9

38.2

Major BPS

53.9

0.1

1.2

46.4

38.9

Major PPT

78.7

0.65

0.7

73.3

24.9

Minor 5ss

27.2

-2.6

33.9

41.8

Minor BPS

-0.5

2.4

54.9

43.6

Associated Gene:

Gene:

RPL36

Ensembl Gene ID:

ENSAPLG00000018797

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041749

1802347 - 1805201

2855

ENSAPLT00000025479

1801894 - 1805201

3308