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Intron Name: Anas_platyrhynchos_platyrhynchos_29_181363_182367_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

181363 - 182367

Intron Length:

1005

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATGTCT

5'SS Class:

strong_major

3'SS Sequence:

ATGCTTGTTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTATGAT

U12 Branch Point Sequence:

ATATCTGTAACT

Flanking Amino Acid:

VPRVQQVPQQVQSVQHVYPS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.7

0.72

35.5

Major BPS

84.6

0.86

41.2

Major PPT

76.5

0.6

73.3

41.4

Minor 5ss

39.4

-1.2

3.3

57.2

Minor BPS

64.6

0.54

83.08

Associated Gene:

Gene:

RFX2

Ensembl Gene ID:

ENSAPLG00000004369

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025872

153664 - 185246

31583

ENSAPLT00000022144

154282 - 185246

30965