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Intron Name: Anas_platyrhynchos_platyrhynchos_29_1827854_1833831_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1827854 - 1833831

Intron Length:

5978

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGGAAA

5'SS Class:

strong_major

3'SS Sequence:

TTGTTTGTTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAAATAT

U12 Branch Point Sequence:

TATAGGTAAATT

Flanking Amino Acid:

LRAELEEFNKSYKKKDADLS

Intron Amino Acid Position:

113

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.6

0.98

0.8

28.8

Major BPS

59.7

0.24

1.1

55.7

39.9

Major PPT

86.1

0.81

0.9

84.6

Minor 5ss

31.6

-2.1

3.1

46.4

Minor BPS

42.5

-0.4

2.5

65.34

45.5

Associated Gene:

Gene:

LMNB2

Ensembl Gene ID:

ENSAPLG00000011044

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011558

1818452 - 1844580

26129