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Intron Name: Anas_platyrhynchos_platyrhynchos_29_1840249_1840735_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1840249 - 1840735

Intron Length:

487

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGTGCC

5'SS Class:

strong_major

3'SS Sequence:

CTTTTCTCATTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTGAC

U12 Branch Point Sequence:

ATAACTTTGACT

Flanking Amino Acid:

YVQLKNNSEKDQSLGNWRLK

Intron Amino Acid Position:

478

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.8

0.96

0.8

78.4

29.1

Major BPS

74.1

0.6

66.7

39.9

Major PPT

78.2

0.64

0.8

78.9

28.3

Minor 5ss

28.5

-2.5

35.5

41.2

Minor BPS

68.6

0.67

1.2

78.97

36.8

Associated Gene:

Gene:

LMNB2

Ensembl Gene ID:

ENSAPLG00000011044

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011558

1818452 - 1844580

26129