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Intron Name: Anas_platyrhynchos_platyrhynchos_29_1841828_1843224_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1841828 - 1843224

Intron Length:

1397

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAGGCTCT

5'SS Class:

strong_major

3'SS Sequence:

TCCTTTTGTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AAACTAT

U12 Branch Point Sequence:

ATCTCCTTGTCT

Flanking Amino Acid:

RTYLVNSDGEEVAVRTVTKS

Intron Amino Acid Position:

554

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.6

0.72

72.3

40.1

Major BPS

48.2

-0.1

1.2

44.9

37.7

Major PPT

78.8

0.65

0.8

76.2

32.4

Minor 5ss

45.1

-0.5

3.2

65.3

46.1

Minor BPS

0.01

3.5

81.31

40.6

Associated Gene:

Gene:

LMNB2

Ensembl Gene ID:

ENSAPLG00000011044

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011558

1818452 - 1844580

26129