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Intron Name: Anas_platyrhynchos_platyrhynchos_29_1854510_1854970_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1854510 - 1854970

Intron Length:

461

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCG|GTGAGTGTG

5'SS Class:

strong_major

3'SS Sequence:

CCTCTCTCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTGCAT

U12 Branch Point Sequence:

TTTGCATTGATA

Flanking Amino Acid:

FPHGTVDSCSGDAGGPLACQ

Intron Amino Acid Position:

1062

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.4

0.76

0.9

72.6

38.9

Major BPS

0.62

1.4

85.7

34.9

Major PPT

82.1

0.72

0.7

76.4

25.6

Minor 5ss

31.3

-2.1

3.3

40.9

45.3

Minor BPS

61.9

0.37

1.7

75.33

36.1

Associated Gene:

Gene:

TMPRSS9

Ensembl Gene ID:

ENSAPLG00000011476

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011964

1854114 - 1868165

14052