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Intron Name: Anas_platyrhynchos_platyrhynchos_29_1856387_1856982_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1856387 - 1856982

Intron Length:

596

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTGAGTCCT

5'SS Class:

strong_major

3'SS Sequence:

TTTTCTGTTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAGTCAC

U12 Branch Point Sequence:

AGTCACAGAACC

Flanking Amino Acid:

CSNGFDESNCDCGLTSALAF

Intron Amino Acid Position:

870

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.2

0.78

0.9

73.2

37.4

Major BPS

67.1

0.43

1.2

69.3

37.7

Major PPT

88.1

0.86

0.8

80.8

36.8

Minor 5ss

31.6

-2.1

2.9

39.6

39.8

Minor BPS

-0.3

1.9

59.05

38.4

Associated Gene:

Gene:

TMPRSS9

Ensembl Gene ID:

ENSAPLG00000011476

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011964

1854114 - 1868165

14052