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Intron Name: Anas_platyrhynchos_platyrhynchos_29_1862943_1863181_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1862943 - 1863181

Intron Length:

239

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGA|GTAAGCCCT

5'SS Class:

major

3'SS Sequence:

GTTTCTCTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTGCAA

U12 Branch Point Sequence:

AGGTCTGCAAAG

Flanking Amino Acid:

WLVSAAHCFTEFQDPAMWAA

Intron Amino Acid Position:

273

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.7

0.44

1.1

44.9

Major BPS

53.2

0.08

1.4

65.6

41.4

Major PPT

85.9

0.81

0.8

77.4

36.9

Minor 5ss

41.8

-0.9

3.1

54.6

43.2

Minor BPS

40.9

-0.8

2.2

43.9

41.7

Associated Gene:

Gene:

TMPRSS9

Ensembl Gene ID:

ENSAPLG00000011476

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011964

1854114 - 1868165

14052