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Intron Name: Anas_platyrhynchos_platyrhynchos_29_1864415_1864775_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1864415 - 1864775

Intron Length:

361

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGAGCC

5'SS Class:

strong_major

3'SS Sequence:

TTGCTGTCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GACTGAA

U12 Branch Point Sequence:

AGTGACTGAAGC

Flanking Amino Acid:

VSPYRPGPKSGSCPGDLFTC

Intron Amino Acid Position:

178

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.1

0.95

0.8

31.7

Major BPS

56.6

0.16

1.2

49.3

Major PPT

73.8

0.54

0.9

65.4

41.1

Minor 5ss

31.7

-2.1

3.3

42.5

44.5

Minor BPS

45.4

-0.3

55.61

42.1

Associated Gene:

Gene:

TMPRSS9

Ensembl Gene ID:

ENSAPLG00000011476

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011964

1854114 - 1868165

14052