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Intron Name: Anas_platyrhynchos_platyrhynchos_29_1866044_1866462_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1866044 - 1866462

Intron Length:

419

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGTGTA

5'SS Class:

strong_major

3'SS Sequence:

TGTTTTCCAGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CAGTAAT

U12 Branch Point Sequence:

TGCTCAGTAATT

Flanking Amino Acid:

SCTGCTILGYRNGNSSVLVR

Intron Amino Acid Position:

105

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

93.2

1.02

0.7

86.6

22.2

Major BPS

64.3

0.36

1.2

65.3

38.6

Major PPT

78.6

0.64

0.9

75.1

34.6

Minor 5ss

30.8

-2.2

3.2

39.9

46.1

Minor BPS

50.1

0.08

2.2

73.64

43.4

Associated Gene:

Gene:

TMPRSS9

Ensembl Gene ID:

ENSAPLG00000011476

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011964

1854114 - 1868165

14052