Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_29_1891151_1892457_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1891151 - 1892457

Intron Length:

1307

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATTGTAC

5'SS Class:

major

3'SS Sequence:

CTTTCTTTCTAAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

CTTTTCATAAGG

Flanking Amino Acid:

GPSDSATHEKLPMVLKVPRL

Intron Amino Acid Position:

390

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.9

0.52

1.1

64.6

35.9

Major BPS

100

1.24

0.5

100

Major PPT

77.1

0.61

82.4

26.6

Minor 5ss

43.2

-0.7

3.1

58.4

46.5

Minor BPS

52.3

-0

63.42

44.6

Associated Gene:

Gene:

SPPL2B

Ensembl Gene ID:

ENSAPLG00000011803

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012324

1886314 - 1906184

19871