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Intron Name: Anas_platyrhynchos_platyrhynchos_29_1894664_1895468_R


Intron Information:

Intron Rank:
6

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
1894664 - 1895468

Intron Length:
805

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
TAG|GTACTCTTA

5'SS Class:
major

3'SS Sequence:
TTTTATTTGTCAG|T

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
TTTTTAT

U12 Branch Point Sequence:
TATTTTTTATTT

Flanking Amino Acid:
VLLYFFYDHLVYVIIGIFCL

Intron Amino Acid Position:
245

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
71.5
0.51
1.1
68
39.7

Major BPS
96.5
1.15
0.6
86
34.2

Major PPT
84
0.77
0.9
84.8
35.4

Minor 5ss
46.4
-0.4
3.1
65
46.2

Minor BPS
65.4
0.56
1.5
80.16
36.3

Associated Gene:

Gene:
SPPL2B

Ensembl Gene ID:

Chromosome:
29

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

1886314 - 1906184
19871