Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_29_1896525_1897220_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1896525 - 1897220

Intron Length:

696

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGCTCA

5'SS Class:

strong_major

3'SS Sequence:

CTTGCCTCTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTGAAT

U12 Branch Point Sequence:

TTCCTTTGAATT

Flanking Amino Acid:

SYSDMLDIGKSFGRSVKGAM

Intron Amino Acid Position:

151

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.6

0.93

0.9

77.7

33.5

Major BPS

74.6

0.61

1.4

34.5

Major PPT

79.8

0.67

0.8

73.3

31.6

Minor 5ss

44.1

-0.6

2.8

56.9

47.3

Minor BPS

58.7

0.35

1.4

73.39

38.1

Associated Gene:

Gene:

SPPL2B

Ensembl Gene ID:

ENSAPLG00000011803

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012324

1886314 - 1906184

19871