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Intron Name: Anas_platyrhynchos_platyrhynchos_29_1908192_1909300_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1908192 - 1909300

Intron Length:

1109

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGTAAT

5'SS Class:

strong_major

3'SS Sequence:

CTCTTTTTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCCTTAT

U12 Branch Point Sequence:

GCCATTGTAACT

Flanking Amino Acid:

VLDGTIEYMRDPDDQYKLTE

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

98.8

1.15

0.6

96.1

12.1

Major BPS

78.8

0.72

67.9

40.1

Major PPT

92.2

0.95

0.6

91.3

20.3

Minor 5ss

37.4

-1.4

2.8

50.6

45.9

Minor BPS

46.4

-0.1

60.02

Associated Gene:

Gene:

LSM7

Ensembl Gene ID:

ENSAPLG00000020930

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045019

1906205 - 1909443

3239