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Intron Name: Anas_platyrhynchos_platyrhynchos_29_1929896_1930817_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1929896 - 1930817

Intron Length:

922

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGTGTC

5'SS Class:

strong_major

3'SS Sequence:

ACCTGTTTTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTGAC

U12 Branch Point Sequence:

TTTTCCTGACCT

Flanking Amino Acid:

YNLIGRTPKEEDLISLAKQN

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.7

1.01

0.7

84.8

25.1

Major BPS

68.9

0.47

59.2

39.1

Major PPT

73.7

0.53

0.9

65.3

40.6

Minor 5ss

31.8

-2.1

3.3

42.9

44.7

Minor BPS

73.4

0.81

1.7

93.08

35.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000022757

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039696

1923397 - 1933756

10360