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Intron Name: Anas_platyrhynchos_platyrhynchos_29_1942679_1943077_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1942679 - 1943077

Intron Length:

399

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAC|GTGAGTTTG

5'SS Class:

major

3'SS Sequence:

GTCTCTCTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTACAG

U12 Branch Point Sequence:

TCTCTCTCCAGT

Flanking Amino Acid:

LISRLIIFPYTVLYNTYYYS

Intron Amino Acid Position:

290

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.7

0.61

1.3

74.8

38.1

Major BPS

48.6

-0

1.5

64.4

41.8

Major PPT

82.6

0.73

0.8

76.7

31.9

Minor 5ss

39.7

-1.1

2.9

48.5

41.2

Minor BPS

44.5

-0.3

2.2

64.73

45.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000012475

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013036

1936064 - 1988834

52771