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Intron Name: Anas_platyrhynchos_platyrhynchos_29_1944298_1945746_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1944298 - 1945746

Intron Length:

1449

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGTCAT

5'SS Class:

strong_major

3'SS Sequence:

CTTGCTCTTACAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATACCAC

U12 Branch Point Sequence:

TTGCTCTTACAG

Flanking Amino Acid:

RECWTGYPQQPLQPSLFWYY

Intron Amino Acid Position:

181

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.8

0.98

0.7

83.1

30.9

Major BPS

48.7

-0

1.3

58.5

37.6

Major PPT

82.7

0.74

0.8

76.1

32.6

Minor 5ss

30.4

-2.2

2.9

40.4

45.7

Minor BPS

49.5

-0.1

1.8

57.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000012475

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013036

1936064 - 1988834

52771