Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_29_2167755_2168610_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2167755 - 2168610

Intron Length:

856

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACAGGAC

5'SS Class:

major

3'SS Sequence:

TCCATCTTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTCAT

U12 Branch Point Sequence:

TTTCTTTTCAGT

Flanking Amino Acid:

ELDRSGGNCTDINECADPVN

Intron Amino Acid Position:

1494

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.4

0.48

1.1

60.9

38.2

Major BPS

92.2

1.05

0.7

91.9

19.6

Major PPT

82.8

0.74

0.8

80.1

31.7

Minor 5ss

27.8

-2.5

3.7

40.2

46.2

Minor BPS

50.6

0.1

76.22

Associated Gene:

Gene:

FBN3

Ensembl Gene ID:

ENSAPLG00000007523

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030104

2072434 - 2188251

115818

ENSAPLT00000007979

2073582 - 2188251

114670

ENSAPLT00000046331

2073582 - 2188251

114670

ENSAPLT00000037920

2073582 - 2188251

114670

ENSAPLT00000031152

2073582 - 2188251

114670