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Intron Name: Anas_platyrhynchos_platyrhynchos_29_2175194_2175582_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

2175194 - 2175582

Intron Length:

389

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAATGTTG

5'SS Class:

major

3'SS Sequence:

GCAATGGTCCCAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

AAGTAAT

U12 Branch Point Sequence:

TGCTCTGTAAGT

Flanking Amino Acid:

GYEVQNDNCIDINECEEEPN

Intron Amino Acid Position:

2018

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.3

0.53

1.1

41.3

Major BPS

67.8

0.44

1.1

67.7

36.5

Major PPT

56.9

0.16

1.1

45.7

45.5

Minor 5ss

40.6

-1.1

3.3

52.4

45.8

Minor BPS

49.5

0.04

2.3

71.8

45.5

Associated Gene:

Gene:

FBN3

Ensembl Gene ID:

ENSAPLG00000007523

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030104

2072434 - 2188251

115818

ENSAPLT00000007979

2073582 - 2188251

114670

ENSAPLT00000046331

2073582 - 2188251

114670

ENSAPLT00000037920

2073582 - 2188251

114670

ENSAPLT00000031152

2073582 - 2188251

114670