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Intron Name: Anas_platyrhynchos_platyrhynchos_29_2179306_2179874_F


Intron Information:

Intron Rank:
56

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
2179306 - 2179874

Intron Length:
569

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTACCAAGG

5'SS Class:
major

3'SS Sequence:
CCTTCCTTCCTAG|A

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TCTTCAT

U12 Branch Point Sequence:
CAGCTCTTCATG

Flanking Amino Acid:
QRRPDGDGCTDENECRTKPG

Intron Amino Acid Position:
2300

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
66.6
0.39
1.2
57.5
47.2

Major BPS
87.4
0.93
0.9
87.9
29.5

Major PPT
76.1
0.59
0.7
68.8
31.6

Minor 5ss
37.3
-1.4
3.1
49.6
46.3

Minor BPS
45.7
-0.4
1.8
44.88
41.9

Associated Gene:

Gene:
FBN3

Ensembl Gene ID:

Chromosome:
29

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

2072434 - 2188251
115818

2073582 - 2188251
114670

2073582 - 2188251
114670

2073582 - 2188251
114670

2073582 - 2188251
114670