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Intron Name: Anas_platyrhynchos_platyrhynchos_29_2182348_2183049_F


Intron Information:

Intron Rank:
60

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
2182348 - 2183049

Intron Length:
702

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTATTCACC

5'SS Class:
major

3'SS Sequence:
CTTTTTACTTTAG|A

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
TTCTTAT

U12 Branch Point Sequence:
TGCTTTTTACTT

Flanking Amino Acid:
ILQEDGKICKDLDECSTKQH

Intron Amino Acid Position:
2494

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
71.4
0.51
1.1
64.3
40

Major BPS
91.4
1.03
0.7
79.9
34.9

Major PPT
83.4
0.75
0.7
82.5
27.8

Minor 5ss
46.8
-0.3
2.4
62
42.4

Minor BPS
57.4
0.31
1.6
71.21
40.9

Associated Gene:

Gene:
FBN3

Ensembl Gene ID:

Chromosome:
29

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

2072434 - 2188251
115818

2073582 - 2188251
114670

2073582 - 2188251
114670

2073582 - 2188251
114670

2073582 - 2188251
114670