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Intron Name: Anas_platyrhynchos_platyrhynchos_29_2248514_2250138_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2248514 - 2250138

Intron Length:

1625

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGGTAG

5'SS Class:

strong_major

3'SS Sequence:

TTTTCTATTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

ATCTTATTGATT

Flanking Amino Acid:

ERDIIPNVLEAMMSGELEIL

Intron Amino Acid Position:

329

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.3

0.93

0.9

75.6

36.7

Major BPS

90.4

0.7

90.2

19.3

Major PPT

86.9

0.83

0.7

86.2

26.5

Minor 5ss

36.1

-1.6

3.3

45.9

49.3

Minor BPS

57.6

0.32

1.6

73.58

37.5

Associated Gene:

Gene:

TIMM44

Ensembl Gene ID:

ENSAPLG00000009557

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009973

2239422 - 2257354

17933