Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_29_2253327_2253925_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2253327 - 2253925

Intron Length:

599

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAAACAG

5'SS Class:

major

3'SS Sequence:

CATTCTGTTCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTGAT

U12 Branch Point Sequence:

TTTTTGTGATCT

Flanking Amino Acid:

LEEITGTVKESLDEVSKSDI

Intron Amino Acid Position:

131

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.3

0.69

64.9

Major BPS

81.2

0.78

1.1

71.4

45.1

Major PPT

78.1

0.63

0.9

41.5

Minor 5ss

30.7

-2.2

3.1

38.3

46.6

Minor BPS

49.5

0.04

2.3

80.23

41.8

Associated Gene:

Gene:

TIMM44

Ensembl Gene ID:

ENSAPLG00000009557

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009973

2239422 - 2257354

17933