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Intron Name: Anas_platyrhynchos_platyrhynchos_29_2254007_2254547_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2254007 - 2254547

Intron Length:

541

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAT|GTAAGTCTT

5'SS Class:

strong_major

3'SS Sequence:

TTTTCCCCCACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTGT

U12 Branch Point Sequence:

TTTTCCCCCACA

Flanking Amino Acid:

DALREARRKYKTIESETVKT

Intron Amino Acid Position:

104

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.2

0.83

83.8

34.5

Major BPS

38.1

-0.7

4.3

71.7

44.6

Major PPT

82.8

0.74

0.7

77.2

24.9

Minor 5ss

42.6

-0.8

3.1

63.9

40.4

Minor BPS

51.9

0.05

2.3

76.63

40.3

Associated Gene:

Gene:

TIMM44

Ensembl Gene ID:

ENSAPLG00000009557

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009973

2239422 - 2257354

17933