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Intron Name: Anas_platyrhynchos_platyrhynchos_29_2259440_2260407_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2259440 - 2260407

Intron Length:

968

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAAGTTGT

5'SS Class:

strong_major

3'SS Sequence:

TTTTCTTTTGAAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GATTAAA

U12 Branch Point Sequence:

TTTCTTTTGAAG

Flanking Amino Acid:

KMLKDKFNECGHVLYADIKM

Intron Amino Acid Position:

564

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.6

0.91

0.8

80.5

34.9

Major BPS

64.8

0.37

1.2

67.9

36.3

Major PPT

84.3

0.77

0.9

86.8

24.4

Minor 5ss

42.1

-0.9

2.9

55.5

43.9

Minor BPS

56.6

0.06

1.5

64.42

37.4

Associated Gene:

Gene:

HNRNPM

Ensembl Gene ID:

ENSAPLG00000010149

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034212

2259276 - 2272166

12891

ENSAPLT00000029260

2259276 - 2272166

12891