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Intron Name: Anas_platyrhynchos_platyrhynchos_29_2262765_2263162_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2262765 - 2263162

Intron Length:

398

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGCTGT

5'SS Class:

strong_major

3'SS Sequence:

TGCTTTCTTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGAAAT

U12 Branch Point Sequence:

ATCCCTGGAAAT

Flanking Amino Acid:

GMGFGMNKMGGMEGPFGMEN

Intron Amino Acid Position:

307

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.7

0.94

0.9

78.8

38.3

Major BPS

67.2

0.43

1.2

73.3

39.1

Major PPT

82.5

0.73

0.7

81.2

30.9

Minor 5ss

45.6

-0.5

2.9

46.2

Minor BPS

43.7

-0.4

2.1

61.88

41.9

Associated Gene:

Gene:

HNRNPM

Ensembl Gene ID:

ENSAPLG00000010149

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034212

2259276 - 2272166

12891

ENSAPLT00000029260

2259276 - 2272166

12891

ENSAPLT00000010584

2259276 - 2281563

22288