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Intron Name: Anas_platyrhynchos_platyrhynchos_29_2263895_2266161_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2263895 - 2266161

Intron Length:

2267

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTC|GTAAGTCTC

5'SS Class:

major

3'SS Sequence:

ATATTTTCTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTGAT

U12 Branch Point Sequence:

GATATCTGAATA

Flanking Amino Acid:

FPPERPQQLPHGLGGIGMGL

Intron Amino Acid Position:

180

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.1

0.5

1.3

68.8

42.2

Major BPS

96.4

1.15

0.6

85.7

34.9

Major PPT

84.1

0.77

0.8

34.9

Minor 5ss

40.3

-1.1

54.3

Minor BPS

56.1

0.19

1.4

63.01

36.7

Associated Gene:

Gene:

HNRNPM

Ensembl Gene ID:

ENSAPLG00000010149

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029260

2259276 - 2272166

12891