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Intron Name: Anas_platyrhynchos_platyrhynchos_29_2266688_2267553_R

Intron Information:

Intron Rank:

Intron Class:

minor

Intron Phase:

Intron Coordinates:

2266688 - 2267553

Intron Length:

866

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAT|GTATCCTTG

5'SS Class:

strong_minor

3'SS Sequence:

AATGAAACGAAAG|C

3'SS Class:

minor_BPS

U2 Branch Point Sequence:

TAATGAA

U12 Branch Point Sequence:

TGATCCTTAATG

Flanking Amino Acid:

EQAIEAVQAISMFNGQLLFD

Intron Amino Acid Position:

255

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

56.3

0.15

1.3

55.3

44.3

Major BPS

67.7

0.44

38.9

Major PPT

45.4

-0.2

1.2

35.8

38.6

Minor 5ss

90.2

1.35

1.1

85.6

31.5

Minor BPS

77.3

0.72

1.3

73.32

39.1

Associated Gene:

Gene:

HNRNPM

Ensembl Gene ID:

ENSAPLG00000010149

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029260

2259276 - 2272166

12891

ENSAPLT00000010584

2259276 - 2281563

22288

ENSAPLT00000034212

2259276 - 2272166

12891