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Intron Name: Anas_platyrhynchos_platyrhynchos_29_2268901_2271098_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2268901 - 2271098

Intron Length:

2198

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTAAGACTC

5'SS Class:

strong_major

3'SS Sequence:

GTGTTTTTTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TACAGAT

U12 Branch Point Sequence:

TACAGATTAACT

Flanking Amino Acid:

LGGRPLKVKEDPDGEHARRA

Intron Amino Acid Position:

139

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.6

0.72

72.7

37.1

Major BPS

66.3

0.41

37.5

Major PPT

82.3

0.73

0.8

81.2

36.5

Minor 5ss

38.2

-1.3

3.3

52.2

38.6

Minor BPS

50.2

0.09

2.1

71.25

Associated Gene:

Gene:

HNRNPM

Ensembl Gene ID:

ENSAPLG00000010149

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034212

2259276 - 2272166

12891

ENSAPLT00000029260

2259276 - 2272166

12891

ENSAPLT00000010584

2259276 - 2281563

22288