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Intron Name: Anas_platyrhynchos_platyrhynchos_29_2298281_2299871_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2298281 - 2299871

Intron Length:

1591

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGTGCC

5'SS Class:

strong_major

3'SS Sequence:

TTCTCTGTTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CCCTCAT

U12 Branch Point Sequence:

TGTCCCTCATCC

Flanking Amino Acid:

MKYIIGIGGVTNGGKTTL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.4

0.83

75.2

36.3

Major BPS

0.5

1.1

71.2

35.2

Major PPT

85.8

0.81

0.8

84.1

30.9

Minor 5ss

33.5

-1.9

3.1

36.8

40.4

Minor BPS

55.5

0.15

1.9

69.5

41.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000024763

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027935

2298255 - 2300875

2621