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Intron Name: Anas_platyrhynchos_platyrhynchos_29_2299963_2300794_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2299963 - 2300794

Intron Length:

832

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGCCCG

5'SS Class:

strong_major

3'SS Sequence:

CACTATATTTCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTTTAT

U12 Branch Point Sequence:

TATTGCTCACTA

Flanking Amino Acid:

CVVHQDDFFKPQDQIEVGED

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.8

0.75

62.3

43.9

Major BPS

78.7

0.71

1.2

71.7

44.6

Major PPT

0.54

0.9

69.9

39.6

Minor 5ss

32.7

-2

39.3

46.1

Minor BPS

47.6

-0.1

2.2

64.55

42.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000024763

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027935

2298255 - 2300875

2621