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Intron Name: Anas_platyrhynchos_platyrhynchos_29_2306538_2306999_R


Intron Information:

Intron Rank:
11

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
2306538 - 2306999

Intron Length:
462

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTACAGCTG

5'SS Class:
major

3'SS Sequence:
TTTGTCACTGCAG|A

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
TTGTCAC

U12 Branch Point Sequence:
CTCTTTGTCACT

Flanking Amino Acid:
EEDHACIPIKKSDPVVSYRE

Intron Amino Acid Position:
656

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
69.3
0.46
1.1
57.8
46.6

Major BPS
74.9
0.62
1.1
77.4
37.4

Major PPT
81
0.7
0.9
74.9
34.7

Minor 5ss
32.6
-2
3.7
46.8
48.5

Minor BPS
45.3
-0.2
2.3
65.89
45.8

Associated Gene:

Gene:
EEF2

Ensembl Gene ID:

Chromosome:
29

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

2305153 - 2313090
7938