Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_29_230783_234691_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

230783 - 234691

Intron Length:

3909

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAACGGCG

5'SS Class:

major

3'SS Sequence:

ACTGTCTTTACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TCTATTTTAATT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.2

0.57

1.2

61.4

42.5

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

79.6

0.67

0.9

72.5

37.1

Minor 5ss

35.1

-1.7

3.5

47.6

Minor BPS

69.9

0.7

1.2

79.53

37.3

Associated Gene:

Gene:

ACSBG2

Ensembl Gene ID:

ENSAPLG00000004090

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038705

230609 - 247253

16645