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Intron Name: Anas_platyrhynchos_platyrhynchos_29_2311297_2311887_R


Intron Information:

Intron Rank:
2

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
2311297 - 2311887

Intron Length:
591

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAC|GTGAGTTGT

5'SS Class:
major

3'SS Sequence:
TCTTTTATTTCAG|A

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
CTTTTAT

U12 Branch Point Sequence:
TTTTCTTTTATT

Flanking Amino Acid:
EQERCITIKSTAISLFYELS

Intron Amino Acid Position:
157

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
75.4
0.6
1.3
74.8
38.1

Major BPS
84.1
0.85
0.9
75.3
39.4

Major PPT
90.4
0.91
0.7
89.1
26

Minor 5ss
37.9
-1.4
3
48.4
41.2

Minor BPS
75.6
0.89
1.5
91.64
31.3

Associated Gene:

Gene:
EEF2

Ensembl Gene ID:

Chromosome:
29

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

2305153 - 2313090
7938