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Intron Name: Anas_platyrhynchos_platyrhynchos_29_23144_23630_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

23144 - 23630

Intron Length:

487

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAATATA

5'SS Class:

strong_major

3'SS Sequence:

CTTTCTTTGCCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AAAACAA

U12 Branch Point Sequence:

AAGGCCTCAAGC

Flanking Amino Acid:

TVLAISRPFISVKFISKIQY

Intron Amino Acid Position:

291

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.6

0.93

0.8

89.5

23.2

Major BPS

48.1

-0.1

0.9

53.4

30.8

Major PPT

81.5

0.71

0.9

76.5

37.6

Minor 5ss

38.7

-1.3

2.9

50.9

45.5

Minor BPS

47.2

-0.2

1.9

54.09

43.6

Associated Gene:

Gene:

ATCAY

Ensembl Gene ID:

ENSAPLG00000004775

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004927

17024 - 31995

14972