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Intron Name: Anas_platyrhynchos_platyrhynchos_29_2327574_2327897_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2327574 - 2327897

Intron Length:

324

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTAAGTTGG

5'SS Class:

strong_major

3'SS Sequence:

CTTTCTGCCTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTAAA

U12 Branch Point Sequence:

AAAAACAAAACA

Flanking Amino Acid:

KVNHSYCSVPGYYPSNKPGV

Intron Amino Acid Position:

218

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.8

0.82

70.1

43.1

Major BPS

81.6

0.78

0.8

24.9

Major PPT

74.6

0.55

0.8

73.4

31.6

Minor 5ss

40.1

-1.1

2.8

50.1

46.1

Minor BPS

42.3

-0.5

51.33

Associated Gene:

Gene:

PIAS4

Ensembl Gene ID:

ENSAPLG00000010840

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011326

2319763 - 2335713

15951