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Intron Name: Anas_platyrhynchos_platyrhynchos_29_2328239_2331607_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2328239 - 2331607

Intron Length:

3369

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTGAGTATG

5'SS Class:

strong_major

3'SS Sequence:

ACTCTTACTGCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTAAA

U12 Branch Point Sequence:

CATCTGTTAAAT

Flanking Amino Acid:

IKHPELCKALVKEKLRLDPD

Intron Amino Acid Position:

296

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.4

0.83

0.8

79.6

35.4

Major BPS

75.2

0.63

1.1

75.9

36.3

Major PPT

76.9

0.61

0.9

70.6

34.1

Minor 5ss

-1.8

2.8

39.3

40.3

Minor BPS

48.3

-0

2.1

67.41

43.1

Associated Gene:

Gene:

PIAS4

Ensembl Gene ID:

ENSAPLG00000010840

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011326

2319763 - 2335713

15951