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Intron Name: Anas_platyrhynchos_platyrhynchos_29_2340129_2341899_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2340129 - 2341899

Intron Length:

1771

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAAGTTG

5'SS Class:

strong_major

3'SS Sequence:

TCTCTCCCCGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CGCTGAC

U12 Branch Point Sequence:

CACCGCTGACCC

Flanking Amino Acid:

FSCNPTPKVSAHLDQPCCKA

Intron Amino Acid Position:

282

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.73

72.8

39.1

Major BPS

53.9

0.1

1.2

46.4

38.9

Major PPT

78.7

0.65

0.7

73.3

24.9

Minor 5ss

39.7

-1.2

3.4

49.2

Minor BPS

40.9

-0.7

45.47

42.8

Associated Gene:

Gene:

SH3GL1

Ensembl Gene ID:

ENSAPLG00000002520

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034094

2337775 - 2348456

10682