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Intron Name: Anas_platyrhynchos_platyrhynchos_29_234324_234691_F


Intron Information:

Intron Rank:
1

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
234324 - 234691

Intron Length:
368

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
ATT|GTAAGGCTG

5'SS Class:
major

3'SS Sequence:
ACTGTCTTTACAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTTTAAT

U12 Branch Point Sequence:
TCTATTTTAATT

Flanking Amino Acid:
MHWTMLCESDAR

Intron Amino Acid Position:
3

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
68.7
0.44
1.1
59.1
45.2

Major BPS
99.5
1.23
0.5
98.2
4.2

Major PPT
79.6
0.67
0.9
72.5
37.1

Minor 5ss
36.9
-1.5
3.5
53.5
44.6

Minor BPS
69.9
0.7
1.2
79.53
37.3

Associated Gene:

Gene:
ACSBG2

Ensembl Gene ID:

Chromosome:
29

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

234317 - 247253
12937