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Intron Name: Anas_platyrhynchos_platyrhynchos_29_2345398_2347273_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2345398 - 2347273

Intron Length:

1876

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCG|GTGAGTGCC

5'SS Class:

strong_major

3'SS Sequence:

TCCTCGCTCAAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTCTT

U12 Branch Point Sequence:

CCTCGCTCAAAG

Flanking Amino Acid:

GKELGEDSNFGDALLDAGES

Intron Amino Acid Position:

110

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.5

0.74

0.9

69.7

35.1

Major BPS

37.5

-0.7

4.3

79.6

35.6

Major PPT

62.7

0.29

62.3

32.4

Minor 5ss

-2.4

3.1

36.8

40.4

Minor BPS

43.2

-0.6

2.1

46.14

46.1

Associated Gene:

Gene:

SH3GL1

Ensembl Gene ID:

ENSAPLG00000002520

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034094

2337775 - 2348456

10682

ENSAPLT00000026580

2337775 - 2348456

10682

ENSAPLT00000002576

2339932 - 2358550

18619