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Intron Name: Anas_platyrhynchos_platyrhynchos_29_2374181_2374743_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2374181 - 2374743

Intron Length:

563

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAGGCT

5'SS Class:

strong_major

3'SS Sequence:

GTTTTGACTTTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAC

U12 Branch Point Sequence:

TTTGTTTTGACT

Flanking Amino Acid:

EEKRLKEEEKRINAQKAEIT

Intron Amino Acid Position:

137

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.8

0.73

72.9

36.4

Major BPS

86.5

0.91

0.8

77.4

37.4

Major PPT

74.3

0.55

0.9

71.4

39.5

Minor 5ss

31.2

-2.1

3.7

47.6

Minor BPS

71.1

0.75

1.3

85.97

34.5

Associated Gene:

Gene:

CHAF1A

Ensembl Gene ID:

ENSAPLG00000008289

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042335

2371001 - 2382197

11197

ENSAPLT00000008641

2371001 - 2380868

9868