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Intron Name: Anas_platyrhynchos_platyrhynchos_29_2374813_2375197_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2374813 - 2375197

Intron Length:

385

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGGTAT

5'SS Class:

strong_major

3'SS Sequence:

CTTACTCTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTCAG

U12 Branch Point Sequence:

CAGACCCTAACA

Flanking Amino Acid:

QKPKTPQAPKILAGSCGKFA

Intron Amino Acid Position:

160

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.5

0.88

0.8

80.8

28.9

Major BPS

0.52

1.5

79.6

35.6

Major PPT

83.9

0.76

0.8

80.9

30.9

Minor 5ss

-1.9

3.4

45.9

49.3

Minor BPS

54.2

0.13

1.8

62.25

43.4

Associated Gene:

Gene:

CHAF1A

Ensembl Gene ID:

ENSAPLG00000008289

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042335

2371001 - 2382197

11197

ENSAPLT00000008641

2371001 - 2380868

9868