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Intron Name: Anas_platyrhynchos_platyrhynchos_29_2376137_2376332_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2376137 - 2376332

Intron Length:

196

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGC|GTGAGTACC

5'SS Class:

major

3'SS Sequence:

GGTTTTATTCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTTTAT

U12 Branch Point Sequence:

TGGGTTTTATTC

Flanking Amino Acid:

RPRNPWSKDCKLLDYEVDSD

Intron Amino Acid Position:

291

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

65.9

0.38

1.3

65.8

40.2

Major BPS

78.7

0.71

1.2

71.7

44.6

Major PPT

79.4

0.66

0.9

70.4

44.5

Minor 5ss

32.5

-2

2.6

33.8

33.9

Minor BPS

47.5

-0.2

1.6

53.51

39.4

Associated Gene:

Gene:

CHAF1A

Ensembl Gene ID:

ENSAPLG00000008289

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042335

2371001 - 2382197

11197

ENSAPLT00000008641

2371001 - 2380868

9868