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Intron Name: Anas_platyrhynchos_platyrhynchos_29_2380519_2380827_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2380519 - 2380827

Intron Length:

309

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGGGAAAA

5'SS Class:

major

3'SS Sequence:

TTGTTTCTGATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAGCCAT

U12 Branch Point Sequence:

TTGTTTCTGATA

Flanking Amino Acid:

CIIVDVQPGKGKVNVGVGIS

Intron Amino Acid Position:

629

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.7

0.68

33.3

Major BPS

54.4

0.11

1.4

64.4

42.8

Major PPT

75.2

0.57

73.1

37.4

Minor 5ss

25.9

-2.8

30.2

43.1

Minor BPS

51.8

0.05

1.6

65.6

35.2

Associated Gene:

Gene:

CHAF1A

Ensembl Gene ID:

ENSAPLG00000008289

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008641

2371001 - 2380868

9868