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Intron Name: Anas_platyrhynchos_platyrhynchos_29_2380519_2381857_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2380519 - 2381857

Intron Length:

1339

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGGGAAAA

5'SS Class:

major

3'SS Sequence:

TTCTACTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTCTAAA

U12 Branch Point Sequence:

TTTGTCTAAAAA

Flanking Amino Acid:

CIIVDVQPGKGSTLAVTETA

Intron Amino Acid Position:

629

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.7

0.68

33.3

Major BPS

67.6

0.44

1.2

69.9

35.3

Major PPT

0.81

0.8

80.6

Minor 5ss

25.9

-2.8

30.2

43.1

Minor BPS

56.3

0.19

1.9

71.75

40.6

Associated Gene:

Gene:

CHAF1A

Ensembl Gene ID:

ENSAPLG00000008289

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042335

2371001 - 2382197

11197