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Intron Name: Anas_platyrhynchos_platyrhynchos_29_2412361_2412949_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2412361 - 2412949

Intron Length:

589

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTGAGTGCT

5'SS Class:

strong_major

3'SS Sequence:

ACTCACCCCACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTCAT

U12 Branch Point Sequence:

TGGCTCTCACCC

Flanking Amino Acid:

HYLPRTDEEPAAPVADGTAA

Intron Amino Acid Position:

820

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.6

0.77

0.9

74.9

35.3

Major BPS

82.6

0.81

0.9

83.3

27.7

Major PPT

66.4

0.37

0.9

32.2

Minor 5ss

29.4

-2.4

3.1

33.3

41.7

Minor BPS

46.9

-0.2

1.8

56.45

41.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000022793

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037306

2410523 - 2415700

5178