About Basic Search Advanced Search Downloads
Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_29_2436072_2437021_R


Intron Information:

Intron Rank:
20

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
2436072 - 2437021

Intron Length:
950

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTAGGAGGA

5'SS Class:
major

3'SS Sequence:
TGCACCTCTGCAG|T

3'SS Class:
major_PPT

U2 Branch Point Sequence:
GCTGCAC

U12 Branch Point Sequence:
TTCCGCTGCACC

Flanking Amino Acid:
IRAGKPYQLQFLYSYLQELS

Intron Amino Acid Position:
831

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
79.9
0.71
1
66.1
40.1

Major BPS
44
-0.3
1.5
51
44.3

Major PPT
72.9
0.52
0.9
65.7
35.9

Minor 5ss
28.4
-2.5
3.5
38.3
46.7

Minor BPS
44.9
-0.4
2.3
60.44
44.6

Associated Gene:

Gene:
DPP9

Ensembl Gene ID:

Chromosome:
29

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

2434943 - 2455123
20181