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Intron Name: Anas_platyrhynchos_platyrhynchos_29_2438597_2439191_R


Intron Information:

Intron Rank:
15

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
2438597 - 2439191

Intron Length:
595

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTAATAATC

5'SS Class:
strong_major

3'SS Sequence:
CCTCCTTCTGCAG|G

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
TTCTAAC

U12 Branch Point Sequence:
CTTTTCTAACCT

Flanking Amino Acid:
TVLFVYGGPQVQLVNNSFKG

Intron Amino Acid Position:
678

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
83.3
0.78
0.9
80.9
31.3

Major BPS
84.6
0.86
0.8
83.9
22.3

Major PPT
81.7
0.71
0.7
76.1
25.9

Minor 5ss
38.1
-1.3
3
52.4
44.3

Minor BPS
57.2
0.3
2
78.66
44.1

Associated Gene:

Gene:
DPP9

Ensembl Gene ID:

Chromosome:
29

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

2434943 - 2455123
20181

2435480 - 2455123
19644